Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_748

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_747: 9115 - K02737 PSMB5 20S proteasome subunit beta 5, at 1784917 to 1786577 9115 mRNA_748: 9116 - Hypothetical Protein, at 1787526 to 1789386 9116 mRNA_749: 9117 - Hypothetical Protein, at 1789709 to 1790560 9117

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,786,697 + -3.0
1,786,700 + -3.2
1,786,700 + -1.6
1,786,709 + -0.5
1,786,881 + -3.7
1,787,445 - 0.3
1,787,566 + -1.3
1,787,569 - -1.0
1,787,601 - -0.4
1,787,712 - 9116 mRNA_748 0.10 -2.0
1,787,733 - 9116 mRNA_748 0.11 0.0
1,787,833 + 9116 mRNA_748 0.16 -0.5
1,787,836 - 9116 mRNA_748 0.17 -1.4
1,787,874 - 9116 mRNA_748 0.19 -2.6
1,787,936 + 9116 mRNA_748 0.22 -3.3
1,788,014 + 9116 mRNA_748 0.26 -1.1
1,788,628 - 9116 mRNA_748 0.59 -2.5
1,788,917 + 9116 mRNA_748 0.75 -1.1
1,789,471 + -0.6
1,789,522 + -2.4
1,789,598 - -0.9
1,789,635 - -2.0
1,789,637 + -1.5
1,789,647 - -2.0
1,789,823 + 9117 mRNA_749 0.13 0.9