Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_645

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_644: 9012 - KOG3020 TatD-related DNase, at 1548576 to 1549928 9012 mRNA_645: 9013 - KOG3104 Mod5 protein sorting/negative effector of RNA Pol III synthesis, at 1550382 to 1551455 9013

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,549,916 - -2.3
1,549,934 + -1.4
1,549,984 + -1.8
1,550,978 + 9013 mRNA_645 0.55 -3.1
1,551,387 - -5.3
1,551,531 + -2.8
1,551,697 - -0.5
1,551,704 - -1.0
1,551,830 + -1.8
1,551,834 + -0.2
1,551,866 + -1.4
1,551,875 - -0.8
1,551,990 - -1.3
1,551,995 - -1.1
1,552,005 - -2.1
1,552,012 + 0.1
1,552,017 - 0.8
1,552,136 - -1.1
1,552,141 + -0.8
1,552,146 - -2.9
1,552,150 - 0.1
1,552,158 - -2.2
1,552,175 + 0.6
1,552,175 - -1.3
1,552,175 - -0.3
1,552,183 + 1.9
1,552,315 + -1.2
1,552,451 - -1.3