Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_644

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_643: 9011 - K15117 SLC25A34_35, OAC1 solute carrier family 25, member 34/35, at 1546203 to 1548129 9011 mRNA_644: 9012 - KOG3020 TatD-related DNase, at 1548576 to 1549928 9012 mRNA_645: 9013 - KOG3104 Mod5 protein sorting/negative effector of RNA Pol III synthesis, at 1550382 to 1551455 9013

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,547,847 + 9011 mRNA_643 0.85 -1.0
1,547,868 - 9011 mRNA_643 0.86 -1.0
1,547,883 + 9011 mRNA_643 0.87 -4.2
1,547,883 + 9011 mRNA_643 0.87 -1.3
1,548,050 - -3.2
1,548,051 + -1.6
1,548,170 + -1.4
1,548,194 + 0.4
1,548,304 + -0.4
1,548,320 - -0.9
1,548,321 - -0.5
1,548,339 - -2.3
1,548,452 + -0.9
1,548,594 - -1.9
1,548,601 + -1.7
1,548,756 + 9012 mRNA_644 0.13 -0.6
1,548,758 - 9012 mRNA_644 0.13 -0.5
1,548,913 - 9012 mRNA_644 0.25 -2.4
1,549,916 - -2.3
1,549,934 + -1.4
1,549,984 + -1.8