Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_635

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_635: 9003 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 1526583 to 1528432 9003 mRNA_636: 9004 - Hypothetical Protein, at 1528555 to 1529690 9004

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,526,021 - -1.1
1,526,327 + 1.0
1,526,875 - 9003 mRNA_635 0.16 -2.3
1,527,006 - 9003 mRNA_635 0.23 0.4
1,527,037 + 9003 mRNA_635 0.25 0.8
1,527,205 + 9003 mRNA_635 0.34 -0.6
1,527,950 + 9003 mRNA_635 0.74 -0.3
1,528,088 - 9003 mRNA_635 0.81 1.7
1,528,358 + -2.2
1,528,367 + -2.5
1,528,368 + -0.6
1,528,481 - -0.9
1,528,492 + -0.1
1,528,498 - -1.9
1,528,502 + -1.8
1,528,517 + -0.9
1,528,643 + -0.3
1,528,779 - 9004 mRNA_636 0.20 0.9
1,528,782 - 9004 mRNA_636 0.20 -2.9
1,528,807 + 9004 mRNA_636 0.22 1.9
1,528,820 + 9004 mRNA_636 0.23 -2.2
1,528,955 - 9004 mRNA_636 0.35 -3.8