Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_599

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_598: 8966 - ProSiteProfiles-F-box domain profile.-PS50181, at 1437888 to 1441324 8966 mRNA_599: 8967 - HMMPfam-2'-5' RNA ligase superfamily-PF13563,SUPERFAMILY--SSF55144, at 1441458 to 1442153 8967

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,440,901 + 8966 mRNA_598 0.88 -2.6
1,440,909 + 8966 mRNA_598 0.88 -1.1
1,441,048 - -1.9
1,441,247 + -0.1
1,441,287 - -0.6
1,441,319 + -2.7
1,441,636 + 8967 mRNA_599 0.26 -1.0
1,441,648 - 8967 mRNA_599 0.27 -1.2
1,441,759 + 8967 mRNA_599 0.43 -1.1
1,441,801 + 8967 mRNA_599 0.49 -2.5
1,441,945 + 8967 mRNA_599 0.70 -2.9
1,442,065 - 8967 mRNA_599 0.87 -1.1
1,442,200 - -0.6
1,442,223 - -0.4
1,442,414 - -1.6
1,442,548 + -1.2
1,442,548 + -2.6
1,442,554 - 0.4
1,442,660 + 0.0
1,442,814 + -1.5
1,442,818 - -0.8
1,442,819 + -1.4
1,442,955 - -1.4
1,442,988 + -2.0
1,443,083 + -4.2
1,443,091 - -3.8
1,443,105 - -0.2
1,443,122 - -0.2
1,443,136 + 1.9
1,443,136 + -1.3
1,443,138 - -0.4
1,443,152 + 0.4