Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_581

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_580: 8948 - Hypothetical Protein, at 1388734 to 1389540 8948 mRNA_581: 8949 - Interpro ERCC4 domain 0, at 1389971 to 1392481 8949 mRNA_582: 8950 - K02876 RP-L15, MRPL15, rplO large subunit ribosomal protein L15, at 1392598 to 1393775 8950

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,388,996 + 8948 mRNA_580 0.32 -2.6
1,389,002 - 8948 mRNA_580 0.33 -2.0
1,389,004 - 8948 mRNA_580 0.33 -0.7
1,389,010 + 8948 mRNA_580 0.34 -2.5
1,389,011 + 8948 mRNA_580 0.34 -2.0
1,389,316 + 8948 mRNA_580 0.72 -0.4
1,389,319 + 8948 mRNA_580 0.72 -3.3
1,389,384 - 8948 mRNA_580 0.81 -0.3
1,389,429 + 8948 mRNA_580 0.86 -1.5
1,389,453 - 8948 mRNA_580 0.89 -1.2
1,389,461 - -1.3
1,389,571 - -1.1
1,389,600 + -0.6
1,389,753 - -0.4
1,390,013 + 0.1
1,390,041 + -0.4
1,390,045 - -0.7
1,390,183 - 1.2
1,390,184 + -1.6
1,390,329 - 8949 mRNA_581 0.14 1.4
1,390,619 + 8949 mRNA_581 0.26 -0.6
1,391,203 - 8949 mRNA_581 0.49 -2.6
1,391,363 + 8949 mRNA_581 0.55 -1.2
1,391,518 - 8949 mRNA_581 0.62 -0.7
1,391,602 - 8949 mRNA_581 0.65 -0.6
1,391,948 + 8949 mRNA_581 0.79 1.4
1,392,232 - -1.5
1,392,267 - -2.3
1,392,349 + -0.3
1,392,655 - -2.4