Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_577

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_576: 8944 - K20182 VPS33 vacuolar protein sorting-associated protein 33, at 1379753 to 1382507 8944 mRNA_577: 8945 - Hypothetical Protein, at 1382684 to 1384433 8945 mRNA_578: 8946 - K05687 PARK7 protein DJ-1, at 1384762 to 1386533 8946

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,382,650 + -2.7
1,382,736 + -1.1
1,383,710 - 8945 mRNA_577 0.59 0.1
1,384,159 + 8945 mRNA_577 0.84 -3.7
1,384,301 + -1.4
1,384,417 - -0.6
1,384,429 - 0.3
1,384,440 - 0.1
1,384,441 - -3.0
1,384,445 + 0.0
1,384,566 + -3.2
1,384,585 + 0.6
1,384,775 + -1.3
1,385,151 + 8946 mRNA_578 0.22 -2.1
1,385,187 - 8946 mRNA_578 0.24 -0.1