Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_566

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_565: 8933 - K03256 TRM6, GCD10 tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit, at 1353645 to 1355726 8933 mRNA_566: 8934 - HMMPfam-Oligosaccaryltransferase-PF10215,SUPERFAMILY--SSF103464, at 1355844 to 1356185 8934 mRNA_567: 8935 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 1356456 to 1359397 8935

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,355,919 + 8934 mRNA_566 0.22 -3.5
1,355,925 + 8934 mRNA_566 0.24 -1.1
1,356,185 + -0.8
1,356,200 + 0.2
1,356,306 + 0.3
1,356,308 - -0.5
1,356,313 - -1.4
1,356,325 - -2.5
1,356,325 - -2.0
1,356,331 + -0.8
1,356,332 + -1.3
1,356,634 - 0.0
1,356,659 - -0.9
1,356,783 + 8935 mRNA_567 0.11 -0.1
1,356,807 + 8935 mRNA_567 0.12 -0.9