Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_564

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_563: 8931 - K05287 PIGF phosphatidylinositol glycan, class F, at 1349685 to 1350957 8931 mRNA_564: 8932 - K01230 MAN1 mannosyl-oligosaccharide alpha-1,2-mannosidase, at 1351046 to 1353534 8932 mRNA_565: 8933 - K03256 TRM6, GCD10 tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit, at 1353645 to 1355726 8933

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,350,225 - 8931 mRNA_563 0.42 -4.3
1,350,536 - 8931 mRNA_563 0.67 0.8
1,350,710 + 8931 mRNA_563 0.81 -2.2
1,350,819 + 8931 mRNA_563 0.89 0.9
1,351,372 + 8932 mRNA_564 0.13 -1.1
1,351,677 - 8932 mRNA_564 0.25 1.4
1,351,820 - 8932 mRNA_564 0.31 -2.8
1,351,827 - 8932 mRNA_564 0.31 -1.6
1,351,836 + 8932 mRNA_564 0.32 -3.4
1,351,837 + 8932 mRNA_564 0.32 -0.9
1,351,837 - 8932 mRNA_564 0.32 -1.4
1,352,549 + 8932 mRNA_564 0.60 -1.2
1,352,556 - 8932 mRNA_564 0.61 -0.1
1,352,810 - 8932 mRNA_564 0.71 -1.8
1,352,885 - 8932 mRNA_564 0.74 -0.9
1,353,414 + 0.7
1,353,441 - -1.2
1,353,481 + -1.3
1,353,533 - -2.8
1,353,584 - -2.1
1,353,607 + -2.5