Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_559

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_558: 8926 - HMMPfam-SH3 domain-PF00018,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 1329845 to 1332752 8926 mRNA_559: 8927 - KOG4672 Uncharacterized conserved low complexity protein, at 1333398 to 1335053 8927

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,332,929 + -0.5
1,332,943 - -2.3
1,333,041 - -4.3
1,333,082 - -3.7
1,333,087 + -3.5
1,333,088 - -3.0
1,333,092 - -1.5
1,333,102 + -3.6
1,333,107 + -3.0
1,333,369 + -3.5
1,333,371 - -0.7
1,333,522 - -2.5
1,333,526 + 1.1
1,333,641 - 8927 mRNA_559 0.15 -1.3
1,334,108 - 8927 mRNA_559 0.43 -2.3
1,335,027 - -2.5
1,335,143 + -3.1
1,335,175 + -0.3
1,335,313 + -2.4
1,335,449 + -1.9
1,335,496 + -2.5
1,335,576 - -0.6
1,335,800 - 1.1
1,336,043 - -2.2