Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_509

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_508: 8876 - K16466 CETN3, CDC31 centrin-3, at 1210355 to 1211163 8876 mRNA_509: 8877 - K11566 ASK1 DASH complex subunit ASK1, at 1211360 to 1213561 8877 mRNA_510: 8878 - K01922 PPCS, coaB phosphopantothenate-cysteine ligase, at 1214489 to 1216016 8878

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,211,223 - -0.0
1,211,226 - -1.2
1,211,230 - -3.9
1,211,286 + -2.2
1,211,353 - -2.5
1,211,408 + -0.8
1,211,549 - -3.5
1,212,296 + 8877 mRNA_509 0.43 -1.5
1,212,665 + 8877 mRNA_509 0.59 0.1
1,213,838 - -2.1
1,213,838 - -2.1
1,213,891 + -0.9
1,214,146 - -0.0