Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_471

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_470: 8838 - KOG0714 Molecular chaperone (DnaJ superfamily), at 1094157 to 1095851 8838 mRNA_471: 8839 - Hypothetical Protein, at 1096183 to 1097842 8839 mRNA_472: 8840 - KOG0987 DNA helicase PIF1/RRM3, at 1097891 to 1099308 8840

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,095,248 - 8838 mRNA_470 0.64 1.5
1,095,481 + 8838 mRNA_470 0.78 -1.6
1,095,486 - 8838 mRNA_470 0.78 -0.5
1,095,686 - -0.7
1,095,966 + -2.5
1,096,129 - -3.6
1,096,208 - -3.6
1,096,414 - 8839 mRNA_471 0.14 0.0
1,096,845 + 8839 mRNA_471 0.40 -0.6
1,097,099 - 8839 mRNA_471 0.55 -0.5
1,097,462 + 8839 mRNA_471 0.77 -2.8
1,097,741 - -0.1
1,097,904 + -3.1