Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_421

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_420: 8788 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 981514 to 982786 8788 mRNA_421: 8789 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 983035 to 984157 8789 mRNA_422: 8790 - KOG0911 Glutaredoxin-related protein, at 984573 to 985710 8790

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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982,477 - 8788 mRNA_420 0.76 -3.0
982,595 - 8788 mRNA_420 0.85 -0.6
982,629 + 8788 mRNA_420 0.88 -1.5
982,878 + -0.5
982,903 - -2.8
982,924 + -0.4
982,926 - -1.1
982,930 + 0.3
982,941 + -2.1
982,941 - -1.1
982,945 - -0.3
982,971 + -2.9
983,087 - -2.2
983,240 - 8789 mRNA_421 0.18 -2.6
983,369 + 8789 mRNA_421 0.30 -1.5
983,645 + 8789 mRNA_421 0.54 -1.1
983,796 - 8789 mRNA_421 0.68 -2.3
983,924 - 8789 mRNA_421 0.79 -0.9
984,063 - -1.3
984,096 + -0.8
984,206 - -2.1
984,485 - -2.9
984,515 + -2.6
984,647 + 0.4