Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_416

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_415: 8783 - K03511 POLK DNA polymerase kappa, at 969041 to 971775 8783 mRNA_416: 8784 - Hypothetical Protein, at 972046 to 973465 8784 mRNA_417: 8785 - KOG4697 Integral membrane protein involved in transport between the late Golgi and endosome, at 973590 to 974560 8785

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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971,085 - 8783 mRNA_415 0.75 -1.9
971,231 + 8783 mRNA_415 0.80 -1.0
971,406 + 8783 mRNA_415 0.86 -2.8
971,520 - -0.9
971,676 - 0.0
971,794 + -1.1
971,807 - -1.1
971,959 - -3.0
971,972 - -2.4
971,990 - -1.3
972,009 + -2.7
972,230 + 8784 mRNA_416 0.13 -1.0
972,248 - 8784 mRNA_416 0.14 -1.2
972,292 + 8784 mRNA_416 0.17 -2.1
972,396 - 8784 mRNA_416 0.25 -0.5
972,397 + 8784 mRNA_416 0.25 0.1
972,818 + 8784 mRNA_416 0.54 -0.5
972,854 + 8784 mRNA_416 0.57 0.0
973,013 + 8784 mRNA_416 0.68 -1.6
973,096 - 8784 mRNA_416 0.74 -0.6
973,264 + 8784 mRNA_416 0.86 -1.0
973,447 - -0.9
973,484 - -0.4
973,582 - -1.8
973,583 - -1.8
973,704 - 8785 mRNA_417 0.12 -1.1
973,721 + 8785 mRNA_417 0.13 -0.7
973,722 - 8785 mRNA_417 0.14 -1.6