Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_394

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_393: 8761 - Hypothetical Protein, at 915771 to 916536 8761 mRNA_394: 8762 - KOG0714 Molecular chaperone (DnaJ superfamily), at 916716 to 918157 8762 mRNA_395: 8763 - KOG2262 Sexual differentiation process protein ISP4, at 918678 to 921418 8763

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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915,752 - -1.0
915,775 + -0.7
916,040 - 8761 mRNA_393 0.35 -2.1
916,347 + 8761 mRNA_393 0.75 0.4
916,516 + -0.4
917,077 - 8762 mRNA_394 0.25 -1.5
917,406 - 8762 mRNA_394 0.48 0.1
917,418 - 8762 mRNA_394 0.49 0.6
917,545 - 8762 mRNA_394 0.57 -2.4
917,588 - 8762 mRNA_394 0.60 -0.4
917,670 + 8762 mRNA_394 0.66 -0.5
917,674 - 8762 mRNA_394 0.66 -1.8
918,268 - -2.7
918,387 - 0.4
918,397 + -1.5
918,410 - -1.7
918,412 - -2.8
918,437 + -2.0
918,548 + -0.4
918,563 - -2.9
918,692 - -1.5
918,693 - -0.5
918,693 + -1.6
918,713 + -1.0
918,817 + -3.5
918,843 + -2.5
918,994 - 8763 mRNA_395 0.12 -1.8
918,997 - 8763 mRNA_395 0.12 -1.7
919,147 - 8763 mRNA_395 0.17 0.2