Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_385

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_383: 8751 - K02922 RP-L37e, RPL37 large subunit ribosomal protein L37e, at 890896 to 891869 8751 mRNA_384: 8752 - KOG0004 Ubiquitin/40S ribosomal protein S27a fusion, at 892471 to 892767 8752 mRNA_385: 8753 - Hypothetical Protein, at 892828 to 898381 8753 mRNA_386: 8754 - Hypothetical Protein, at 898444 to 900294 8754

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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892,974 + -2.0
892,987 + -0.2
892,994 - -0.5
893,000 - 0.7
893,403 - 8753 mRNA_385 0.10 -2.5
893,711 + 8753 mRNA_385 0.16 -0.6
893,730 + 8753 mRNA_385 0.16 -1.7
894,133 - 8753 mRNA_385 0.23 2.7
894,149 + 8753 mRNA_385 0.24 -0.7
894,613 + 8753 mRNA_385 0.32 -4.5
895,451 - 8753 mRNA_385 0.47 -0.7
895,598 + 8753 mRNA_385 0.50 -2.5
895,715 - 8753 mRNA_385 0.52 -2.1
896,020 - 8753 mRNA_385 0.57 -0.4
896,496 - 8753 mRNA_385 0.66 -0.6
896,766 - 8753 mRNA_385 0.71 -3.1
897,198 - 8753 mRNA_385 0.79 -2.0
897,348 - 8753 mRNA_385 0.81 -0.0
897,640 - 8753 mRNA_385 0.87 -0.3
897,652 - 8753 mRNA_385 0.87 -0.8
897,659 - 8753 mRNA_385 0.87 -1.7
897,664 + 8753 mRNA_385 0.87 -3.5
897,790 - 8753 mRNA_385 0.89 -0.4
897,791 + 8753 mRNA_385 0.89 -1.6
897,792 - 8753 mRNA_385 0.89 -1.9
897,806 - 8753 mRNA_385 0.90 -1.7
897,819 + 8753 mRNA_385 0.90 -0.7
897,830 - -4.6
897,838 + -1.9
897,926 + -0.1
897,933 + -3.3
897,939 - -2.0
898,538 - -0.7
898,540 - -2.9
898,801 - 8754 mRNA_386 0.19 -0.5
898,832 + 8754 mRNA_386 0.21 -1.8
899,121 - 8754 mRNA_386 0.37 -2.5