Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_355

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_354: 8722 - K17583 NOM1 nucleolar MIF4G domain-containing protein 1, at 827130 to 830488 8722 mRNA_355: 8723 - Hypothetical Protein, at 830801 to 831631 8723 mRNA_356: 8724 - K02727 PSMA3 20S proteasome subunit alpha 7, at 832333 to 833691 8724

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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830,525 + -2.5
830,544 + -3.0
830,555 - -1.1
830,682 + 1.0
830,693 + -2.6
830,717 + -1.4
830,729 - 0.1
831,108 - 8723 mRNA_355 0.37 -1.0
831,277 + 8723 mRNA_355 0.57 -2.8
831,285 - 8723 mRNA_355 0.58 -1.0
831,601 + -2.8
831,607 - -0.8
831,740 - -1.1
831,752 - -0.4
831,754 - -2.2
831,770 - -3.4
831,771 + -1.4
831,789 + -1.9
831,922 - -0.7
831,927 - -0.9
831,929 - -0.3
831,932 + -0.8
831,936 + -0.5
831,938 - -0.3
831,939 - -2.3
831,961 + -2.3
832,001 - -0.5
832,012 - -3.8
832,080 - -1.6
832,199 - -1.7
832,356 + -2.7