Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_326

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_325: 8693 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 770334 to 776057 8693 mRNA_326: 8694 - K17983 SHE9 sensitive to high expression protein 9, mitochondrial, at 776267 to 777781 8694 mRNA_327: 8695 - KOG0378 40S ribosomal protein S4, at 778008 to 779249 8695

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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775,269 + 8693 mRNA_325 0.86 -3.6
775,425 + 8693 mRNA_325 0.89 -1.9
775,688 - -1.4
776,012 + -0.1
776,136 - -0.8
776,136 - 1.0
776,139 + -2.6
776,146 - -1.7
776,154 - -0.5
776,164 + -0.8
776,170 - -0.5
776,241 - -1.8
776,478 + 8694 mRNA_326 0.14 -0.1
777,052 + 8694 mRNA_326 0.52 -0.6
777,187 - 8694 mRNA_326 0.61 -1.0
777,189 + 8694 mRNA_326 0.61 -1.1
777,335 + 8694 mRNA_326 0.70 1.2
777,617 + 8694 mRNA_326 0.89 -4.3
777,627 + 8694 mRNA_326 0.90 -1.9
777,790 + -1.8
777,798 + -1.1
777,814 + -0.6
777,819 + -1.2
777,840 + -0.7
778,699 - 8695 mRNA_327 0.56 0.8