Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_320

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_319: 8687 - KOG2134 Polynucleotide kinase 3' phosphatase, at 759335 to 760537 8687 mRNA_320: 8688 - Hypothetical Protein, at 760656 to 762781 8688 mRNA_321: 8689 - KOG4317 Predicted Zn-finger protein, at 762839 to 764616 8689

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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759,880 - 8687 mRNA_319 0.45 -1.4
760,182 - 8687 mRNA_319 0.70 -0.5
760,325 - 8687 mRNA_319 0.82 -0.8
760,329 - 8687 mRNA_319 0.83 -1.4
760,350 + 8687 mRNA_319 0.84 -3.2
760,450 + -2.0
760,611 - -2.9
760,639 - -0.3
760,752 - -1.9
760,753 - -2.1
760,753 + -0.2
760,753 - 1.5
760,755 + -1.1
760,756 + -1.0
761,027 - 8688 mRNA_320 0.17 -0.8
761,046 + 8688 mRNA_320 0.18 -2.1
761,680 - 8688 mRNA_320 0.48 0.3
761,802 - 8688 mRNA_320 0.54 -2.9
761,914 + 8688 mRNA_320 0.59 -1.3
762,182 - 8688 mRNA_320 0.72 -2.0
762,477 - 8688 mRNA_320 0.86 0.1
762,501 + 8688 mRNA_320 0.87 -0.9
762,645 + -2.2
762,785 - -2.1
762,794 + -1.2