Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_282

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_281: 8649 - KOG0653 Cyclin B and related kinase-activating proteins, at 669704 to 671491 8649 mRNA_282: 8650 - Hypothetical Protein, at 672440 to 673215 8650 mRNA_283: 8651 - K00872 thrB1 homoserine kinase, at 673914 to 675244 8651

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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671,498 - 0.8
671,498 - -1.6
671,509 - -0.8
671,537 + -0.8
671,561 - -3.1
671,564 + -2.5
671,665 - -1.0
671,674 - -2.4
671,681 + 1.3
671,681 - -0.9
671,694 + -2.4
671,694 + -0.5
671,700 - -0.3
671,704 + -1.9
671,825 + -0.2
671,843 + 0.2
671,845 - -1.3
671,846 - -2.3
671,848 + -3.2
671,850 - -3.3
671,854 + -1.3
671,863 - -4.1
671,866 - 0.1
671,866 + -0.5
671,866 + -0.7
671,867 - 0.6
671,873 + 1.0
671,875 - -2.6
671,875 - -1.1
671,881 + -1.9
671,885 + -2.4
671,886 - -0.7
671,893 - -3.4
671,902 + 1.1
671,920 + 0.0
671,927 + -3.7
671,995 - -3.1
672,003 + -2.2
672,004 - -1.2
672,009 - -1.0
672,018 + 0.4
672,023 - 1.9
672,029 - -0.6
672,029 + -2.3
672,038 - -2.3
672,044 - -0.5
672,044 + -1.1
672,045 + -1.7
672,049 + -2.4
672,058 - -0.7
672,139 - -1.9
672,146 + -1.8
672,164 + 0.9
672,165 - -2.6
672,165 - -2.2
672,169 - -3.0
672,175 - -0.8
672,190 - -1.7
672,276 + -0.1
672,293 - -1.0
672,309 + 0.3
672,320 - -0.7
672,331 + 0.2
672,336 - -1.0
672,357 + -0.9
672,360 + 0.3
672,363 + -3.1
672,372 - -0.2
672,375 + -0.5
672,376 - -1.4
672,379 + -2.8
672,379 + 0.6
672,386 + -1.3
672,395 + -2.3
672,399 + -4.1
672,403 - -2.3
672,430 - -0.5
672,479 + -2.0
672,506 - -0.3
672,529 - 8650 mRNA_282 0.11 -2.5
672,589 + 8650 mRNA_282 0.19 -1.6
672,699 + 8650 mRNA_282 0.33 -1.9
672,774 - 8650 mRNA_282 0.43 -0.9
672,799 + 8650 mRNA_282 0.46 -1.2
672,799 - 8650 mRNA_282 0.46 -1.2
672,800 + 8650 mRNA_282 0.46 -0.4
672,805 + 8650 mRNA_282 0.47 -0.6
672,821 - 8650 mRNA_282 0.49 -2.8
672,824 - 8650 mRNA_282 0.49 -0.5
672,827 + 8650 mRNA_282 0.50 0.2
672,828 + 8650 mRNA_282 0.50 -1.0
672,851 + 8650 mRNA_282 0.53 0.2
672,876 - 8650 mRNA_282 0.56 -2.3
672,952 - 8650 mRNA_282 0.66 -0.1
673,010 + 8650 mRNA_282 0.73 -1.0
673,014 + 8650 mRNA_282 0.74 -3.2
673,059 - 8650 mRNA_282 0.80 -2.3
673,165 + 1.5
673,215 + -1.0
673,523 + 0.4
673,882 + -1.9