Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_261

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_260: 8628 - KOG2534 DNA polymerase IV (family X), at 625910 to 627593 8628 mRNA_261: 8629 - KOG1745 Histones H3 and H4, at 627613 to 628433 8629 mRNA_262: 8630 - HMMPfam-Flavin reductase like domain-PF01613, at 628698 to 628997 8630

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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626,704 + 8628 mRNA_260 0.47 0.5
626,748 - 8628 mRNA_260 0.50 -1.8
626,888 - 8628 mRNA_260 0.58 -1.6
627,058 + 8628 mRNA_260 0.68 1.0
627,061 + 8628 mRNA_260 0.68 0.2
627,208 + 8628 mRNA_260 0.77 -3.0
627,215 - 8628 mRNA_260 0.77 -2.6
627,500 + 0.1
627,547 + -2.4
627,596 - -2.4
627,680 - -2.1
627,924 + 8629 mRNA_261 0.38 -0.5
628,067 + 8629 mRNA_261 0.55 -2.8
628,194 - 8629 mRNA_261 0.71 -0.1
628,201 + 8629 mRNA_261 0.72 -2.1
628,357 - -0.1
629,082 - -1.4
629,376 - -2.5
629,376 + -3.2
629,391 + -0.5
629,392 + -0.7