Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_165

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_164: 8532 - Hypothetical Protein, at 404595 to 407143 8532 mRNA_165: 8533 - K12602 WDR61, REC14, SKI8 WD repeat-containing protein 61, at 407555 to 409013 8533 mRNA_166: 8534 - K07936 RAN GTP-binding nuclear protein Ran, at 409327 to 410564 8534

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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406,735 + 8532 mRNA_164 0.84 -0.9
406,737 + 8532 mRNA_164 0.84 -3.0
406,887 - 8532 mRNA_164 0.90 -1.5
407,039 - -2.4
407,178 + -0.3
407,180 + -1.4
407,188 - -3.2
407,490 - -2.0
407,505 - -2.3
407,516 + -2.4
407,652 + -0.1
407,800 + 8533 mRNA_165 0.17 -1.3
408,365 - 8533 mRNA_165 0.56 -0.3
408,655 + 8533 mRNA_165 0.75 0.0
408,660 - 8533 mRNA_165 0.76 -0.8
408,703 + 8533 mRNA_165 0.79 0.3
408,787 - 8533 mRNA_165 0.84 -0.5
409,102 + -3.0
409,105 + -2.0
409,147 + -3.2