Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_164

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_163: 8531 - Hypothetical Protein, at 403276 to 404295 8531 mRNA_164: 8532 - Hypothetical Protein, at 404595 to 407143 8532 mRNA_165: 8533 - K12602 WDR61, REC14, SKI8 WD repeat-containing protein 61, at 407555 to 409013 8533

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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403,681 + 8531 mRNA_163 0.40 -1.5
403,868 + 8531 mRNA_163 0.58 -2.9
403,941 - 8531 mRNA_163 0.65 -1.2
403,988 - 8531 mRNA_163 0.70 -2.3
404,253 + -2.1
404,422 - -1.8
404,437 + -2.1
404,441 + -1.5
404,558 + -1.4
404,576 + -1.4
405,261 - 8532 mRNA_164 0.26 2.0
405,269 + 8532 mRNA_164 0.26 -0.7
405,367 + 8532 mRNA_164 0.30 -2.9
405,574 + 8532 mRNA_164 0.38 -1.6
405,727 + 8532 mRNA_164 0.44 -1.8
405,730 - 8532 mRNA_164 0.45 -2.8
405,997 - 8532 mRNA_164 0.55 -3.1
405,999 - 8532 mRNA_164 0.55 -1.7
406,000 + 8532 mRNA_164 0.55 -2.5
406,001 - 8532 mRNA_164 0.55 -1.6
406,001 + 8532 mRNA_164 0.55 -1.9
406,002 - 8532 mRNA_164 0.55 -2.6
406,022 - 8532 mRNA_164 0.56 -1.6
406,026 + 8532 mRNA_164 0.56 -1.0
406,037 - 8532 mRNA_164 0.57 0.7
406,038 + 8532 mRNA_164 0.57 0.1
406,183 + 8532 mRNA_164 0.62 -1.1
406,324 + 8532 mRNA_164 0.68 -3.5
406,326 + 8532 mRNA_164 0.68 -1.5
406,455 + 8532 mRNA_164 0.73 1.2
406,457 + 8532 mRNA_164 0.73 0.1
406,466 + 8532 mRNA_164 0.73 -1.6
406,468 - 8532 mRNA_164 0.73 -0.7
406,735 + 8532 mRNA_164 0.84 -0.9
406,737 + 8532 mRNA_164 0.84 -3.0
406,887 - 8532 mRNA_164 0.90 -1.5
407,039 - -2.4
407,178 + -0.3
407,180 + -1.4
407,188 - -3.2
407,490 - -2.0
407,505 - -2.3
407,516 + -2.4
407,652 + -0.1
407,800 + 8533 mRNA_165 0.17 -1.3