Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_145

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_144: 8512 - K00698 CHS1 chitin synthase, at 358360 to 365387 8512 mRNA_145: 8513 - KOG3299 Uncharacterized conserved protein, at 365672 to 367146 8513 mRNA_146: 8514 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 367275 to 368042 8514

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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365,192 + -1.0
365,197 + -1.1
365,314 + 0.1
365,440 + -0.2
365,465 - -2.6
365,472 - 0.3
365,517 + -0.2
365,617 + -1.0
365,631 + 1.2
365,759 - -0.4
365,759 - -1.6
365,766 + -0.1
366,504 - 8513 mRNA_145 0.56 -1.1
366,772 - 8513 mRNA_145 0.75 0.6
366,780 - 8513 mRNA_145 0.75 -3.6