Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_143

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_142: 8510 - HMMPfam-Protein of unknown function (DUF3712)-PF12505, at 343005 to 355699 8510 mRNA_143: 8511 - KOG4136 Predicted mitochondrial cholesterol transporter, at 356168 to 357922 8511 mRNA_144: 8512 - K00698 CHS1 chitin synthase, at 358360 to 365387 8512

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
355,374 - -2.0
355,403 - -3.6
355,418 - -1.3
355,442 - -0.1
355,531 + -0.8
355,647 + 0.4
355,755 - -3.1
355,785 + -0.6
355,804 + 0.1
356,035 + -1.6
356,179 - -0.7
356,187 - 0.6
356,537 - 8511 mRNA_143 0.21 -0.8
356,609 - 8511 mRNA_143 0.25 -2.9
356,663 + 8511 mRNA_143 0.28 -2.2
356,682 + 8511 mRNA_143 0.29 -1.2
357,702 + 8511 mRNA_143 0.87 -0.5
357,818 - -2.7
357,821 - -0.5
357,848 - -1.4
357,851 - -1.6
357,968 + -0.8
357,976 + -1.8
357,977 - -2.8
357,987 - -0.4
357,987 + -0.6
357,994 + -0.9
357,997 - -1.1
358,000 - -1.1
358,000 - -0.4
358,005 - -2.0
358,005 - -1.5
358,006 - -0.3
358,006 + -1.3
358,079 - 0.3
358,123 - -1.9
358,126 - -0.9
358,131 - -1.4
358,133 - 1.8
358,133 - -0.2
358,134 - -2.3
358,141 + -2.2
358,151 + -2.3
358,156 + 2.3
358,157 + -2.1
358,157 + -0.7
358,161 + -0.6
358,254 + 1.7
358,281 - -2.5
358,290 - -1.0
358,314 + -3.1
358,432 - -1.0
358,470 - -2.5
358,513 + -0.7
358,604 - -0.9
358,609 + -1.1
358,627 - -2.8
358,640 + -2.4
358,789 + -0.1