Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_138

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_137: 8505 - SUPERFAMILY--SSF53474, at 328204 to 331764 8505 mRNA_138: 8506 - KOG4473 Uncharacterized membrane protein, at 332077 to 333617 8506 mRNA_139: 8507 - K14538 NUG1, GNL3 nuclear GTP-binding protein, at 333941 to 336511 8507

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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331,237 + 8505 mRNA_137 0.85 -0.1
331,250 - 8505 mRNA_137 0.86 -2.5
331,321 + 8505 mRNA_137 0.88 0.8
331,637 - -3.9
331,815 - -2.1
331,821 + -1.4
331,832 + 0.4
331,963 + -2.2
331,979 - -2.9
331,990 + -1.0
332,001 + -0.6
332,011 + -2.9
332,137 - -0.6
332,158 + -0.7
332,446 - 8506 mRNA_138 0.24 -2.1
332,447 + 8506 mRNA_138 0.24 -2.2
332,450 + 8506 mRNA_138 0.24 -1.9
332,692 - 8506 mRNA_138 0.40 -2.5
332,758 + 8506 mRNA_138 0.44 -2.2
333,228 - 8506 mRNA_138 0.75 -0.8
333,619 + -1.7
333,769 + -0.5
333,818 + 0.6
334,024 - -0.9
334,539 - 8507 mRNA_139 0.23 -0.8