Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_110

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_109: 8477 - Hypothetical Protein, at 259065 to 259869 8477 mRNA_110: 8478 - KOG3399 Predicted Yippee-type zinc-binding protein, at 260137 to 260817 8478 mRNA_111: 8479 - KOG0254 Predicted transporter (major facilitator superfamily), at 260930 to 263760 8479

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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259,287 - 8477 mRNA_109 0.28 -2.2
259,765 + 8477 mRNA_109 0.87 -1.7
259,910 - -3.3
259,917 - -1.5
259,955 + -3.1
259,992 - -2.9
260,130 + 2.0
260,258 + 8478 mRNA_110 0.18 -2.7
260,272 - 8478 mRNA_110 0.20 0.9
260,309 + 8478 mRNA_110 0.25 -0.3
260,420 + 8478 mRNA_110 0.42 -1.3
260,424 + 8478 mRNA_110 0.42 -1.6
260,436 - 8478 mRNA_110 0.44 0.4
260,752 + -2.2
260,890 - 0.0
260,921 + -1.7
260,990 + -0.1
261,103 - 0.9
261,144 + -1.5
261,150 - -3.0
261,760 + 8479 mRNA_111 0.29 -0.1