Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_97

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_96: 8464 - KOG4031 Vesicle coat protein clathrin, light chain, at 228445 to 229589 8464 mRNA_97: 8465 - KOG2234 Predicted UDP-galactose transporter, at 229785 to 233167 8465 mRNA_98: 8466 - Hypothetical Protein, at 233874 to 234659 8466

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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229,618 - -1.5
229,618 + -0.8
229,681 - -1.9
229,688 + -0.0
230,132 + 8465 mRNA_97 0.10 -1.3
230,155 - 8465 mRNA_97 0.11 -2.2
230,173 + 8465 mRNA_97 0.11 -0.9
230,329 + 8465 mRNA_97 0.16 -2.3
230,399 - 8465 mRNA_97 0.18 -1.8
230,575 - 8465 mRNA_97 0.23 -1.7
230,744 + 8465 mRNA_97 0.28 -0.8
230,750 - 8465 mRNA_97 0.29 -1.5
231,010 - 8465 mRNA_97 0.36 -1.0
231,079 - 8465 mRNA_97 0.38 -3.9
231,190 - 8465 mRNA_97 0.42 0.4
231,279 - 8465 mRNA_97 0.44 -0.0
231,476 + 8465 mRNA_97 0.50 0.6
231,641 - 8465 mRNA_97 0.55 -0.4
231,800 - 8465 mRNA_97 0.60 -0.2
232,261 + 8465 mRNA_97 0.73 -3.2
232,277 - 8465 mRNA_97 0.74 1.6
232,833 - -0.7
232,980 + -3.4
232,995 - -2.6
233,157 - -2.3
233,237 + 1.3
233,256 - -2.3
233,256 - 0.2
233,263 - -2.4
233,276 + -0.8
233,282 - -1.9
233,290 + -3.2
233,290 + -1.1
233,290 + -1.1
233,298 - -1.5
233,298 + -1.8
233,298 - -1.0
233,301 + -2.8
233,301 - -0.5
233,301 - -0.9
233,302 + -1.8
233,315 + -0.7
233,316 - -0.6
233,316 + -0.5
233,317 - -2.3
233,317 - -0.9
233,319 - -0.5
233,320 - -1.2
233,321 + -0.8
233,321 - -0.9
233,321 - -0.4
233,323 - -3.7
233,323 - -2.2
233,324 + -0.1
233,324 + -3.2
233,325 + 1.4
233,325 - -0.9
233,326 + -2.4
233,329 + -0.5
233,332 + -1.2
233,335 + -1.4
233,336 + -3.2
233,337 + -1.2
233,337 + 0.5
233,350 + -1.2
233,350 + 2.4
233,354 - -1.2
233,359 + -0.1
233,365 - -2.0
233,365 - -1.8
233,365 + -2.3
233,375 - -0.3
233,379 + -2.1
233,383 + -0.2
233,387 - -0.6
233,404 + -1.2
233,404 + -3.1
233,408 - -1.5
233,436 - -2.4
233,436 - 0.4
233,436 - -0.5
233,437 - 0.2
233,441 + 1.5
233,442 - -1.8
233,443 - 0.5
233,444 + -3.6
233,446 - -2.7
233,448 - -3.1
233,450 + -1.7
233,451 + -1.7
233,452 + 0.1
233,459 - -0.6
233,488 - -1.7
233,491 - -2.9
233,507 + -0.6
233,512 - 0.1
233,518 - -0.2
233,520 - -1.4
233,523 + -0.7
233,529 - -1.5
233,539 - -2.2
233,541 + 0.0
233,549 + -2.5
233,551 + -0.2
233,559 - -1.3
233,560 + -0.4
233,568 + -0.3
233,571 - -2.8
233,573 + -0.6
233,613 + -1.8
233,657 - -0.2
233,706 + -1.9
233,726 + -2.4
233,851 - -0.4
233,852 + -1.9
233,859 - -0.6
233,865 + 1.5
234,006 - 8466 mRNA_98 0.17 -2.8
234,139 - 8466 mRNA_98 0.34 0.2