Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_83

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_82: 8450 - KOG0519 Sensory transduction histidine kinase, at 194842 to 197479 8450 mRNA_83: 8451 - Hypothetical Protein, at 197528 to 201315 8451 mRNA_84: 8452 - K01522 FHIT bis(5'-adenosyl)-triphosphatase, at 201823 to 202716 8452

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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196,625 - 8450 mRNA_82 0.68 -1.9
196,798 - 8450 mRNA_82 0.74 -1.1
196,939 - 8450 mRNA_82 0.79 -1.7
196,940 - 8450 mRNA_82 0.80 -2.9
196,940 + 8450 mRNA_82 0.80 -0.9
196,952 - 8450 mRNA_82 0.80 -0.9
196,987 - 8450 mRNA_82 0.81 -1.3
197,665 - -0.6
198,073 + 8451 mRNA_83 0.14 -2.0
198,124 - 8451 mRNA_83 0.16 -0.4
198,350 + 8451 mRNA_83 0.22 -2.2
198,535 + 8451 mRNA_83 0.27 -1.7
198,549 + 8451 mRNA_83 0.27 -4.0
198,730 + 8451 mRNA_83 0.32 -1.1
198,851 + 8451 mRNA_83 0.35 -2.4
199,000 + 8451 mRNA_83 0.39 -3.0
199,141 - 8451 mRNA_83 0.43 -1.1
199,258 - 8451 mRNA_83 0.46 0.2
199,265 + 8451 mRNA_83 0.46 -1.5
199,642 + 8451 mRNA_83 0.56 -1.2
200,230 - 8451 mRNA_83 0.71 -1.1
200,480 + 8451 mRNA_83 0.78 -0.6
200,612 + 8451 mRNA_83 0.81 -1.2
200,628 - 8451 mRNA_83 0.82 -1.6
200,894 - 8451 mRNA_83 0.89 -2.7
201,076 - 1.0
201,380 - -1.4
201,449 - -1.3
201,487 + -1.0
201,510 - -2.7
201,795 - -1.1
201,796 - -0.7
202,233 + 8452 mRNA_84 0.46 -3.1