Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_54

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_53: 8421 - K03014 RPB6, POLR2F DNA-directed RNA polymerases I, II, and III subunit RPABC2, at 126911 to 127593 8421 mRNA_54: 8422 - KOG1505 Lysophosphatidic acid acyltransferase LPAAT and related acyltransferases, at 128047 to 129356 8422 mRNA_55: 8423 - HMMPfam-Endonuclease/Exonuclease/phosphatase family-PF03372,SUPERFAMILY--SSF56219, at 129465 to 130938 8423

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
127,637 + 0.4
127,716 - -1.4
127,733 - -1.1
127,779 - -3.2
127,892 + 1.5
127,908 - -2.5
127,913 + -0.8
128,042 + -0.8
128,185 + 8422 mRNA_54 0.11 -3.2
128,195 + 8422 mRNA_54 0.11 -1.6
128,199 + 8422 mRNA_54 0.12 -1.0
128,340 - 8422 mRNA_54 0.22 0.8
128,484 - 8422 mRNA_54 0.33 0.0
128,488 - 8422 mRNA_54 0.34 -1.1
128,618 - 8422 mRNA_54 0.44 -2.0
128,981 + 8422 mRNA_54 0.71 -3.9
129,214 + 8422 mRNA_54 0.89 -2.4
129,267 - 0.2
129,346 - -2.8
129,406 + 0.2