Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_10

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_9: 8377 - Hypothetical Protein, at 28711 to 29599 8377 mRNA_10: 8378 - Hypothetical Protein, at 29867 to 30741 8378 mRNA_11: 8379 - Hypothetical Protein, at 31186 to 32050 8379

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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28,937 + 8377 mRNA_9 0.25 -2.0
29,049 - 8377 mRNA_9 0.38 -3.7
29,062 - 8377 mRNA_9 0.39 -0.5
29,112 + 8377 mRNA_9 0.45 -0.5
29,220 - 8377 mRNA_9 0.57 -1.2
29,316 + 8377 mRNA_9 0.68 -2.2
29,501 + 8377 mRNA_9 0.89 -1.2
29,659 + -1.1
29,931 - -2.5
29,938 + -1.8
29,943 - -1.7
30,094 - 8378 mRNA_10 0.26 -2.0
30,106 + 8378 mRNA_10 0.27 -1.2
30,136 + 8378 mRNA_10 0.31 -4.0
30,170 - 8378 mRNA_10 0.35 -5.1
30,178 + 8378 mRNA_10 0.36 -0.1
30,369 + 8378 mRNA_10 0.57 -1.0
30,766 + -0.3
30,806 + -1.5
30,947 - -1.9
30,953 + -1.1
31,039 - -0.0
31,123 - -3.8
31,252 + -0.8
31,328 + 8379 mRNA_11 0.16 -2.6
31,671 - 8379 mRNA_11 0.56 -3.2
31,700 - 8379 mRNA_11 0.59 -2.6
31,707 + 8379 mRNA_11 0.60 -0.7