Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8471

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8469: 16837 - K14654 RIB7, arfC 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase, at 1306981 to 1308021 16837 mRNA_8470: 16838 - Hypothetical Protein, at 1308191 to 1308727 16838 mRNA_8471: 16839 - Hypothetical Protein, at 1308779 to 1309608 16839 mRNA_8472: 16840 - KOG1769 Ubiquitin-like proteins, at 1310090 to 1310770 16840

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,308,359 - 16838 mRNA_8470 0.31 0.1
1,308,660 - 16838 mRNA_8470 0.87 -0.6
1,308,785 - -0.7
1,308,825 - -0.5
1,309,096 - 16839 mRNA_8471 0.38 -2.9
1,309,108 - 16839 mRNA_8471 0.40 -3.7
1,309,377 - 16839 mRNA_8471 0.72 -3.9
1,309,507 - 16839 mRNA_8471 0.88 -0.4
1,309,545 + -1.7
1,309,666 + 0.9
1,309,756 + -0.1
1,310,136 + -0.8
1,310,383 - 16840 mRNA_8472 0.43 -0.7
1,310,397 + 16840 mRNA_8472 0.45 -3.0
1,310,401 + 16840 mRNA_8472 0.46 -1.4