Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8415

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8414: 16782 - Hypothetical Protein, at 1164242 to 1165926 16782 mRNA_8415: 16783 - Hypothetical Protein, at 1166198 to 1166736 16783 mRNA_8416: 16784 - BLAST Protein byr4 [Hypsizygus marmoreus], at 1167455 to 1171070 16784

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,165,440 + 16782 mRNA_8414 0.71 -0.9
1,165,623 - 16782 mRNA_8414 0.82 -0.2
1,165,675 - 16782 mRNA_8414 0.85 0.1
1,165,965 + 0.2
1,166,672 + 16783 mRNA_8415 0.88 -0.5
1,166,780 - -0.5
1,166,793 - -0.8
1,167,096 + -0.7
1,167,131 + 0.2
1,167,133 - -1.0
1,167,135 - -2.2
1,167,154 - -2.3
1,167,254 - -3.2
1,167,311 + -0.6
1,167,380 - -0.7
1,167,416 + -1.8
1,167,564 - -1.0
1,167,727 - -1.7
1,167,728 - -0.9