Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8389

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8389: 16757 - Hypothetical Protein, at 1098543 to 1099640 16757 mRNA_8390: 16758 - K00387 SUOX sulfite oxidase, at 1099792 to 1101469 16758

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,097,567 - -1.1
1,097,605 - -2.7
1,097,727 + -1.9
1,097,757 + 0.5
1,097,757 - 0.9
1,097,897 + -0.4
1,097,996 + -1.8
1,098,052 - -1.7
1,098,337 + -3.0
1,098,444 - -1.1
1,098,464 - -3.0
1,098,632 - -2.4
1,098,652 + -0.4
1,098,653 + 16757 mRNA_8389 0.10 -1.4
1,098,807 - 16757 mRNA_8389 0.24 0.0
1,098,925 + 16757 mRNA_8389 0.35 -0.5
1,098,926 + 16757 mRNA_8389 0.35 -1.0
1,098,983 - 16757 mRNA_8389 0.40 -1.1
1,099,090 + 16757 mRNA_8389 0.50 -0.1
1,099,227 + 16757 mRNA_8389 0.62 -3.6
1,099,383 - 16757 mRNA_8389 0.77 -3.4
1,099,414 - 16757 mRNA_8389 0.79 -1.9
1,099,636 - -0.3
1,099,644 + -0.4
1,099,949 + 0.6
1,099,957 + -2.3
1,100,118 - 16758 mRNA_8390 0.19 -4.8
1,100,207 + 16758 mRNA_8390 0.25 -0.7
1,100,237 - 16758 mRNA_8390 0.27 -0.6