Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8384

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8383: 16751 - Interpro Stealth protein CR2, conserved region 2 Stealth protein CR3, conserved region 3, at 1081454 to 1084319 16751 mRNA_8384: 16752 - KOG4401 Uncharacterized conserved protein, at 1084970 to 1085744 16752 mRNA_8385: 16753 - HMMPfam-Protein of unknown function, DUF608-PF04685,HMMPfam-Bacterial alpha-L-rhamnosidase-PF05592,SUPERFAMILY--SSF48208, at 1085898 to 1088411 16753

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,084,308 + -2.8
1,084,390 + 0.1
1,084,552 + -0.6
1,084,657 + 0.5
1,084,710 - 1.5
1,084,765 - -2.9
1,084,820 - -0.0
1,084,820 - -0.3
1,084,910 - -1.2
1,084,913 + 0.9
1,085,191 - 16752 mRNA_8384 0.29 -1.6
1,085,199 - 16752 mRNA_8384 0.30 -3.0
1,085,301 + 16752 mRNA_8384 0.43 -0.2
1,085,342 - 16752 mRNA_8384 0.48 -3.5
1,085,350 + 16752 mRNA_8384 0.49 -1.1
1,085,351 + 16752 mRNA_8384 0.49 -2.0
1,085,532 - 16752 mRNA_8384 0.73 -1.5
1,085,542 + 16752 mRNA_8384 0.74 -1.0
1,085,656 - 16752 mRNA_8384 0.89 -1.4
1,085,775 - -1.0
1,085,915 + -1.3
1,086,221 - 16753 mRNA_8385 0.13 -1.7
1,086,221 - 16753 mRNA_8385 0.13 -1.6
1,086,392 + 16753 mRNA_8385 0.20 -1.3