Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8367

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8366: 16734 - BLAST similar to An01g09190 [Aspergillus kawachii IFO 4308], at 1045638 to 1046770 16734 mRNA_8367: 16735 - Hypothetical Protein, at 1046951 to 1048222 16735 mRNA_8368: 16736 - K07119 K07119 uncharacterized protein, at 1048733 to 1050184 16736

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,045,977 + 16734 mRNA_8366 0.30 -1.5
1,046,385 + 16734 mRNA_8366 0.66 1.0
1,046,824 - -0.3
1,046,839 - -0.3
1,046,850 - 0.4
1,046,852 + -3.9
1,046,865 + -0.1
1,046,922 + -1.0
1,046,973 - -1.7
1,047,021 - -0.6
1,047,029 - -0.7
1,047,177 + 16735 mRNA_8367 0.18 -0.5
1,047,197 - 16735 mRNA_8367 0.19 1.6
1,047,608 + 16735 mRNA_8367 0.52 -0.4
1,047,638 - 16735 mRNA_8367 0.54 -2.5
1,047,732 + 16735 mRNA_8367 0.61 -3.1
1,047,795 + 16735 mRNA_8367 0.66 -0.9
1,047,795 + 16735 mRNA_8367 0.66 0.2
1,047,931 - 16735 mRNA_8367 0.77 -1.2
1,047,937 + 16735 mRNA_8367 0.78 -2.6
1,047,946 - 16735 mRNA_8367 0.78 -0.6
1,047,949 + 16735 mRNA_8367 0.78 -2.7
1,047,952 - 16735 mRNA_8367 0.79 -1.6
1,048,080 + 16735 mRNA_8367 0.89 1.7
1,048,082 - 16735 mRNA_8367 0.89 -3.2
1,048,106 - -0.1
1,048,114 - -3.1
1,048,219 + -2.8
1,048,229 - -1.7
1,048,253 + -2.0
1,048,274 + -3.6
1,048,374 + -1.2
1,048,374 + -0.3
1,048,374 + -2.1
1,048,381 + -1.2
1,048,385 + -1.1
1,048,386 + -3.2
1,048,391 - -2.4
1,048,393 + -1.4
1,048,394 - -0.2
1,048,413 + 1.0
1,048,425 + -2.4
1,048,425 - -0.7
1,048,512 - -2.1
1,048,543 + -0.0
1,048,547 + -1.6
1,048,548 - -3.5
1,048,559 - -1.8
1,048,560 + -1.0
1,048,566 - -2.1
1,048,566 - -2.4
1,048,568 - -3.1
1,048,570 + -1.9
1,048,577 + -1.3
1,048,716 + 2.0
1,049,075 - 16736 mRNA_8368 0.24 -0.7
1,049,076 + 16736 mRNA_8368 0.24 -0.4