Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8329

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8327: 16695 - K10251 HSD17B12, KAR, IFA38 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase, at 948369 to 949936 16695 mRNA_8328: 16696 - Hypothetical Protein, at 950123 to 950641 16696 mRNA_8329: 16697 - KOG0527 HMG-box transcription factor, at 950835 to 951817 16697 mRNA_8330: 16698 - BLAST clp1-like protein [Schizophyllum commune H4-8], at 951883 to 952795 16698

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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950,388 - 16696 mRNA_8328 0.51 -3.5
950,526 + 16696 mRNA_8328 0.78 -1.9
950,697 - -1.9
950,818 + -1.5
950,827 + -2.5
950,953 + 16697 mRNA_8329 0.12 -2.8
951,119 - 16697 mRNA_8329 0.29 0.2
951,860 - -1.6
952,185 + 16698 mRNA_8330 0.33 -0.7
952,214 - 16698 mRNA_8330 0.36 -1.1
952,306 - 16698 mRNA_8330 0.46 -2.6
952,326 - 16698 mRNA_8330 0.49 -1.7
952,471 - 16698 mRNA_8330 0.64 -2.0
952,479 + 16698 mRNA_8330 0.65 -0.8
952,479 - 16698 mRNA_8330 0.65 -1.7
952,565 + 16698 mRNA_8330 0.75 -0.6
952,600 + 16698 mRNA_8330 0.79 -3.1
952,627 - 16698 mRNA_8330 0.81 -1.1
952,736 - -0.9
952,741 + 1.4
952,759 + -1.5
952,768 + -0.9