Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8324

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8323: 16691 - HMMPfam-Abscisic acid G-protein coupled receptor-PF12430,HMMPfam-Protein of unknown function (DUF3735)-PF12537, at 938985 to 941043 16691 mRNA_8324: 16692 - K14026 SEL1, SEL1L SEL1 protein, at 941199 to 945074 16692 mRNA_8325: 16693 - KOG1688 Golgi proteins involved in ER retention (RER), at 945635 to 946237 16693

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
940,380 - 16691 mRNA_8323 0.68 -0.1
940,523 + 16691 mRNA_8323 0.75 -1.8
940,551 + 16691 mRNA_8323 0.76 -3.2
940,784 - 16691 mRNA_8323 0.87 -1.2
940,785 - 16691 mRNA_8323 0.87 -0.3
940,828 + 16691 mRNA_8323 0.90 -0.9
940,844 + -2.2
940,916 + -1.8
940,940 + -1.6
940,980 + 0.6
941,079 + -3.6
941,081 - -2.7
941,131 - -1.5
941,134 + -0.6
941,149 + -1.6
941,427 + -2.1
941,431 + -1.1
941,833 - 16692 mRNA_8324 0.16 -1.0
941,833 + 16692 mRNA_8324 0.16 0.8
942,001 - 16692 mRNA_8324 0.21 -1.4
942,596 + 16692 mRNA_8324 0.36 -0.8
943,339 - 16692 mRNA_8324 0.55 -0.0
943,499 - 16692 mRNA_8324 0.59 -1.7
943,625 - 16692 mRNA_8324 0.63 0.2
943,777 + 16692 mRNA_8324 0.67 -1.6
944,361 - 16692 mRNA_8324 0.82 1.3
944,643 - 16692 mRNA_8324 0.89 -0.2
944,803 + -2.8
945,120 + -0.9
945,430 + -2.9
945,995 - 16693 mRNA_8325 0.60 -0.8