Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8320

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8319: 16687 - HMMPfam-Protein of unknown function (DUF2370)-PF10176, at 930724 to 932736 16687 mRNA_8320: 16688 - KOG1516 Carboxylesterase and related proteins, at 932873 to 935850 16688 mRNA_8321: 16689 - Hypothetical Protein, at 936288 to 937256 16689

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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931,888 - 16687 mRNA_8319 0.58 1.6
932,068 - 16687 mRNA_8319 0.67 -2.7
932,167 + 16687 mRNA_8319 0.72 3.0
932,170 + 16687 mRNA_8319 0.72 -3.1
932,183 + 16687 mRNA_8319 0.72 -2.2
932,190 + 16687 mRNA_8319 0.73 -1.1
932,194 - 16687 mRNA_8319 0.73 -1.0
932,334 - 16687 mRNA_8319 0.80 -1.2
932,369 - 16687 mRNA_8319 0.82 -2.8
932,493 + 16687 mRNA_8319 0.88 -1.9
932,500 + 16687 mRNA_8319 0.88 -1.6
932,785 - -0.8
932,941 + -0.6
933,067 + -2.0
933,082 + -1.6
933,249 + 16688 mRNA_8320 0.13 -2.5
933,528 + 16688 mRNA_8320 0.22 -0.5
933,666 + 16688 mRNA_8320 0.27 -0.3
933,669 - 16688 mRNA_8320 0.27 -0.6
933,848 - 16688 mRNA_8320 0.33 0.9
933,943 - 16688 mRNA_8320 0.36 -2.4
934,091 - 16688 mRNA_8320 0.41 -0.4
934,104 + 16688 mRNA_8320 0.41 1.2
934,133 + 16688 mRNA_8320 0.42 -1.9
934,434 + 16688 mRNA_8320 0.52 0.6
934,788 - 16688 mRNA_8320 0.64 -0.5
934,837 - 16688 mRNA_8320 0.66 -2.8
934,953 + 16688 mRNA_8320 0.70 -0.8
935,413 + 16688 mRNA_8320 0.85 -0.1
935,529 + 16688 mRNA_8320 0.89 -1.3
936,076 - -0.7
936,082 + -0.4
936,251 + -1.0
936,261 + -1.3
936,386 - 16689 mRNA_8321 0.10 -3.1
936,416 - 16689 mRNA_8321 0.13 0.2
936,419 + 16689 mRNA_8321 0.14 -1.6
936,556 + 16689 mRNA_8321 0.28 -2.5
936,669 + 16689 mRNA_8321 0.39 -2.1
936,685 + 16689 mRNA_8321 0.41 0.0