Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8304

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8303: 16671 - KOG1398 Uncharacterized conserved protein, at 890417 to 892180 16671 mRNA_8304: 16672 - K01336 E3.4.21.48 cerevisin, at 892725 to 894788 16672 mRNA_8305: 16673 - Hypothetical Protein, at 895280 to 896635 16673

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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891,771 - 16671 mRNA_8303 0.77 0.3
891,916 - 16671 mRNA_8303 0.85 -0.2
891,933 + 16671 mRNA_8303 0.86 1.7
892,209 + -1.5
892,217 + -1.8
892,237 + -1.0
892,339 - -2.0
892,373 - -3.0
892,374 + -1.9
892,384 - -0.4
892,393 - 0.6
892,394 - -2.6
892,395 - 0.3
892,404 - -0.7
892,410 + -1.7
892,499 - 0.0
892,506 + -0.1
892,532 + -0.8
892,556 - -5.2
892,660 - 1.4
892,660 - -3.2
892,661 + -3.3
892,669 - 0.3
892,669 + 0.1
892,671 - -1.9
892,678 - -0.1
892,689 - -1.7
892,802 - -2.1
892,814 + -2.2
892,816 + -1.9
892,826 - -0.6
892,831 - -1.8
892,831 - -2.6
892,864 + 0.8
892,865 + -1.8
892,872 - -2.2
892,954 + 16672 mRNA_8304 0.11 -2.1
892,968 - 16672 mRNA_8304 0.12 -0.6
892,996 + 16672 mRNA_8304 0.13 -0.2
892,997 + 16672 mRNA_8304 0.13 -2.6
892,999 + 16672 mRNA_8304 0.13 -2.3
893,033 + 16672 mRNA_8304 0.15 -0.3
893,123 - 16672 mRNA_8304 0.19 -1.4
893,125 - 16672 mRNA_8304 0.19 -3.4
893,128 + 16672 mRNA_8304 0.20 -1.0
893,133 - 16672 mRNA_8304 0.20 -0.1
893,139 + 16672 mRNA_8304 0.20 -0.4
893,256 - 16672 mRNA_8304 0.26 2.2
893,271 + 16672 mRNA_8304 0.26 -2.3
893,272 - 16672 mRNA_8304 0.27 -3.0
893,284 + 16672 mRNA_8304 0.27 -1.6
893,290 + 16672 mRNA_8304 0.27 -0.5
893,302 - 16672 mRNA_8304 0.28 -2.0
893,306 + 16672 mRNA_8304 0.28 -1.2
893,306 - 16672 mRNA_8304 0.28 -1.4
893,306 - 16672 mRNA_8304 0.28 -2.1
893,309 + 16672 mRNA_8304 0.28 0.7
893,317 + 16672 mRNA_8304 0.29 -0.8
893,333 + 16672 mRNA_8304 0.29 -0.1
893,333 + 16672 mRNA_8304 0.29 -1.0
893,442 - 16672 mRNA_8304 0.35 -0.4
893,464 + 16672 mRNA_8304 0.36 -1.8
893,467 - 16672 mRNA_8304 0.36 -1.4
893,476 + 16672 mRNA_8304 0.36 -0.5
893,863 + 16672 mRNA_8304 0.55 -3.5
893,910 + 16672 mRNA_8304 0.57 -2.7
894,050 + 16672 mRNA_8304 0.64 -1.8
894,073 - 16672 mRNA_8304 0.65 -2.9
894,311 - 16672 mRNA_8304 0.77 -2.4
894,761 + -0.8