Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8295

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8294: 16662 - Hypothetical Protein, at 869009 to 869206 16662 mRNA_8295: 16663 - Hypothetical Protein, at 869651 to 870841 16663 mRNA_8296: 16664 - K19951 TBC1D8_9 TBC1 domain family member 8/9, at 871259 to 875299 16664

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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868,662 + -1.9
868,687 - -3.2
868,711 - -1.3
868,840 - -3.5
868,972 + -2.0
869,045 + 16662 mRNA_8294 0.18 -1.1
869,061 - 16662 mRNA_8294 0.26 0.4
869,117 - 16662 mRNA_8294 0.55 0.5
869,127 + 16662 mRNA_8294 0.60 0.2
869,166 + 16662 mRNA_8294 0.79 0.0
869,175 - 16662 mRNA_8294 0.84 2.4
869,178 + 16662 mRNA_8294 0.85 -1.7
869,195 + -0.2
869,218 - -0.8
869,233 + 0.1
869,261 + 0.3
869,262 - -0.1
869,270 + 0.1
869,273 - -1.6
869,273 - -1.7
869,276 - -2.0
869,278 - -1.7
869,288 + -2.3
869,290 + -2.7
869,292 - -2.9
869,302 + -0.8
869,303 + -4.3
869,345 - -3.0
869,359 - -0.6
869,371 + -0.9
869,383 - -1.3
869,396 - -0.9
869,407 + -2.7
869,409 - -0.7
869,425 + -3.0
869,559 - -0.1
869,876 + 16663 mRNA_8295 0.19 -1.5
870,153 - 16663 mRNA_8295 0.42 -3.2
870,579 - 16663 mRNA_8295 0.78 -1.6
870,601 + 16663 mRNA_8295 0.80 -1.2
870,606 - 16663 mRNA_8295 0.80 -2.3
871,016 - 1.2
871,200 - -2.1
871,201 - -3.2
871,209 - -2.5
871,354 + -0.4
871,682 + 16664 mRNA_8296 0.10 -2.5