Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8277

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8276: 16644 - K06630 YWHAE 14-3-3 protein epsilon, at 822982 to 824358 16644 mRNA_8277: 16645 - Hypothetical Protein, at 824512 to 825100 16645 mRNA_8278: 16646 - K16330 K16330 pseudouridylate synthase / pseudouridine kinase, at 825362 to 828181 16646

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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823,530 - 16644 mRNA_8276 0.40 -3.5
823,562 + 16644 mRNA_8276 0.42 -0.7
823,727 + 16644 mRNA_8276 0.54 -1.3
823,731 - 16644 mRNA_8276 0.54 -1.3
823,828 - 16644 mRNA_8276 0.61 -3.2
823,884 + 16644 mRNA_8276 0.66 -2.5
823,946 + 16644 mRNA_8276 0.70 -2.1
823,997 + 16644 mRNA_8276 0.74 -1.2
824,003 - 16644 mRNA_8276 0.74 -3.8
824,027 + 16644 mRNA_8276 0.76 -1.5
824,033 + 16644 mRNA_8276 0.76 -2.0
824,105 + 16644 mRNA_8276 0.82 -2.6
824,136 + 16644 mRNA_8276 0.84 -1.9
824,305 + -2.0
824,310 - -1.5
824,563 - -2.9
824,719 - 16645 mRNA_8277 0.35 -2.0
824,741 - 16645 mRNA_8277 0.39 -1.4
824,883 + 16645 mRNA_8277 0.63 -1.0
825,269 - -2.6
825,281 - -0.3
825,609 + -2.3