Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8270

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8269: 16637 - Hypothetical Protein, at 810911 to 812187 16637 mRNA_8270: 16638 - Hypothetical Protein, at 812469 to 813656 16638 mRNA_8271: 16639 - K14397 NUDT21, CPSF5, CFIM25 cleavage and polyadenylation specificity factor subunit 5, at 814047 to 815109 16639

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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811,968 + 16637 mRNA_8269 0.83 -0.9
812,115 + 1.6
812,277 + -1.8
812,716 + 16638 mRNA_8270 0.21 -0.7
812,826 - 16638 mRNA_8270 0.30 -0.2
813,155 + 16638 mRNA_8270 0.58 0.2
813,173 + 16638 mRNA_8270 0.59 -2.4
813,226 + 16638 mRNA_8270 0.64 -2.1
813,282 + 16638 mRNA_8270 0.68 -0.2
813,592 + -2.3
813,682 + -1.4
813,728 + -1.4
813,866 - 0.1
813,874 + -1.0
813,874 + -0.4
814,025 - -2.3
814,032 - -1.8
814,038 + -1.2
814,050 - 0.1
814,144 - -3.1
814,156 - 16639 mRNA_8271 0.10 -1.2
814,289 - 16639 mRNA_8271 0.23 -1.1
814,311 - 16639 mRNA_8271 0.25 -0.3
814,316 + 16639 mRNA_8271 0.25 1.9
814,317 - 16639 mRNA_8271 0.25 -0.4
814,318 - 16639 mRNA_8271 0.25 -0.4
814,609 - 16639 mRNA_8271 0.53 -2.6
814,625 - 16639 mRNA_8271 0.54 -1.5
814,631 + 16639 mRNA_8271 0.55 -2.7
814,636 + 16639 mRNA_8271 0.55 -0.8