Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8266

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8265: 16633 - KOG0444 Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats), at 802560 to 804214 16633 mRNA_8266: 16634 - K07297 ADIPOR adiponectin receptor, at 804995 to 806356 16634 mRNA_8267: 16635 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 806792 to 809289 16635

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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804,098 + -0.1
804,109 - 0.4
804,115 + 0.4
804,158 - -0.9
804,158 - -0.8
804,159 + -2.5
804,161 + -1.0
804,161 + -0.1
804,167 - -0.7
804,173 + -0.6
804,179 - 0.6
804,185 - -2.3
804,188 - -3.3
804,192 + -1.4
804,211 - 0.6
804,216 + -0.2
804,221 - -1.7
804,231 - 0.1
804,235 + 0.5
804,244 - -2.7
804,318 + -3.5
804,322 + -1.8
804,323 + -1.7
804,330 + -1.6
804,338 - -1.9
804,455 - -0.1
804,494 + -1.8
804,613 + -0.6
804,634 - -0.2
804,640 - -1.1
804,645 + 0.2
804,658 - 1.0
804,660 - -1.5
804,674 - -0.8
804,701 - -3.9
804,845 - -1.2
804,870 + -0.6
804,891 - -4.1
804,923 - -1.0
805,029 + -2.5
805,068 + -1.3
805,522 - 16634 mRNA_8266 0.39 -1.0
805,938 + 16634 mRNA_8266 0.69 -2.7
806,226 - 0.3
806,271 + -0.7
806,382 - -2.2
806,390 - -0.0
806,508 - -1.4
806,526 + 0.4
806,526 - -0.9
806,528 - -0.7
806,530 - -0.8
806,530 - -1.2
806,539 - -2.1
806,550 - -2.4
806,554 - -1.1
806,557 + -1.1
806,560 + -1.3
806,589 - 0.9
806,639 - -0.0
806,640 + -0.4
806,648 - -0.1
806,691 - -3.0
806,718 + -0.4
806,730 + -0.9
806,969 - -0.0
806,970 + -2.3
806,999 - -1.4
807,168 - 16635 mRNA_8267 0.15 -2.0