Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8254

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8253: 16621 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 774552 to 775844 16621 mRNA_8254: 16622 - HMMPfam-Stc1 domain-PF12898, at 776228 to 777333 16622 mRNA_8255: 16623 - K01792 E5.1.3.15 glucose-6-phosphate 1-epimerase, at 777687 to 778914 16623

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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775,340 + 16621 mRNA_8253 0.61 -1.4
775,470 - 16621 mRNA_8253 0.71 -2.9
775,474 + 16621 mRNA_8253 0.71 -0.4
775,606 + 16621 mRNA_8253 0.82 -0.7
775,906 - -2.3
775,923 + -2.8
775,938 + 0.2
776,030 + 1.4
776,087 - -0.6
776,092 + -0.7
776,226 + -0.8
776,625 - 16622 mRNA_8254 0.36 -1.2
776,801 + 16622 mRNA_8254 0.52 -2.4
777,072 + 16622 mRNA_8254 0.76 -0.2
777,189 + 16622 mRNA_8254 0.87 -0.3
777,630 + -2.9