Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8251

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8250: 16618 - K17069 MET17 O-acetylhomoserine/O-acetylserine sulfhydrylase, at 764459 to 766227 16618 mRNA_8251: 16619 - HMMPfam-SacI homology domain-PF02383,ProSiteProfiles-Sac phosphatase domain profile.-PS50275, at 766880 to 770400 16619 mRNA_8252: 16620 - HMMPfam-Domain of unknown function (DUF4451)-PF14616, at 770970 to 773846 16620

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
765,908 + 16618 mRNA_8250 0.82 -0.6
766,023 + 16618 mRNA_8250 0.88 -1.7
766,059 + 0.3
766,071 - -2.3
766,201 - -1.1
766,214 + -4.6
766,284 - -2.2
766,331 - -0.3
766,340 - -2.2
766,358 - -0.4
766,505 + -1.3
766,651 - -0.5
766,655 + -1.7
766,667 + -0.4
766,958 - -3.9
767,244 - 16619 mRNA_8251 0.10 -3.7
767,251 - 16619 mRNA_8251 0.11 -1.3
767,399 + 16619 mRNA_8251 0.15 0.1
767,961 - 16619 mRNA_8251 0.31 -1.4
768,124 + 16619 mRNA_8251 0.35 -1.1
768,250 + 16619 mRNA_8251 0.39 -1.0
768,269 + 16619 mRNA_8251 0.39 -3.4
768,519 + 16619 mRNA_8251 0.47 -2.1
768,540 + 16619 mRNA_8251 0.47 -2.3
768,791 - 16619 mRNA_8251 0.54 -3.1
768,817 + 16619 mRNA_8251 0.55 -0.8
769,109 - 16619 mRNA_8251 0.63 -1.7
769,227 + 16619 mRNA_8251 0.67 -0.2
769,319 + 16619 mRNA_8251 0.69 -1.4
769,396 + 16619 mRNA_8251 0.71 -0.0
770,315 - -1.5
770,404 + -1.9
770,427 - -1.7
770,438 + -0.8
770,445 + -1.0
770,453 + -3.5
770,461 + -3.0
770,461 - -1.4
770,581 - -3.2
770,584 - -1.7
770,736 - -2.4
770,748 - -0.9
770,749 - -1.7
770,750 + -2.3
770,778 + -2.9
770,913 + -2.4
770,916 - -0.5
770,923 - -2.0
771,059 - 2.3
771,254 - -1.6