Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8249

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8248: 16616 - KOG2945 Predicted RNA-binding protein, at 760832 to 762310 16616 mRNA_8249: 16617 - SUPERFAMILY--SSF52047, at 762768 to 764331 16617 mRNA_8250: 16618 - K17069 MET17 O-acetylhomoserine/O-acetylserine sulfhydrylase, at 764459 to 766227 16618

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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761,847 + 16616 mRNA_8248 0.69 -1.6
762,562 - -1.4
762,850 + 0.3
762,873 + -2.3
762,994 - 16617 mRNA_8249 0.14 -1.6
763,028 + 16617 mRNA_8249 0.17 -1.6
763,047 - 16617 mRNA_8249 0.18 0.6
763,440 - 16617 mRNA_8249 0.43 -0.4
763,444 - 16617 mRNA_8249 0.43 -2.1
763,758 - 16617 mRNA_8249 0.63 -1.6
763,774 + 16617 mRNA_8249 0.64 -3.5
764,149 - 16617 mRNA_8249 0.88 -3.0
764,311 - -1.0
764,316 + -0.4
764,324 + -1.5
764,475 - -0.5
764,605 - -1.6
764,708 - 16618 mRNA_8250 0.14 -4.1
764,711 - 16618 mRNA_8250 0.14 -4.9
764,880 - 16618 mRNA_8250 0.24 -2.0
764,894 + 16618 mRNA_8250 0.25 -1.3
764,911 + 16618 mRNA_8250 0.26 -1.7
764,915 - 16618 mRNA_8250 0.26 -3.3