Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8240

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8239: 16607 - K00101 E1.1.2.3, lldD L-lactate dehydrogenase (cytochrome), at 738207 to 740675 16607 mRNA_8240: 16608 - K14350 AADACL2 arylacetamide deacetylase-like 2, at 740976 to 744696 16608 mRNA_8241: 16609 - Hypothetical Protein, at 744876 to 746640 16609

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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740,086 - 16607 mRNA_8239 0.76 -2.2
740,230 + 16607 mRNA_8239 0.82 -2.1
740,522 - -2.0
740,662 + -3.6
740,685 + -1.1
740,809 - 0.2
740,811 - -1.9
740,819 - -1.1
740,834 - -2.2
740,946 + 0.4
740,984 - -1.9
741,123 + -0.2
741,435 - 16608 mRNA_8240 0.12 -2.0
741,715 + 16608 mRNA_8240 0.20 -0.9
742,263 - 16608 mRNA_8240 0.35 -0.5
742,423 - 16608 mRNA_8240 0.39 -1.6
742,551 - 16608 mRNA_8240 0.42 -2.4
742,700 + 16608 mRNA_8240 0.46 -0.2
742,708 - 16608 mRNA_8240 0.47 -0.7
743,125 + 16608 mRNA_8240 0.58 -2.9
743,238 - 16608 mRNA_8240 0.61 -0.5
743,406 - 16608 mRNA_8240 0.65 -3.2
743,414 + 16608 mRNA_8240 0.66 -1.8
743,751 - 16608 mRNA_8240 0.75 -3.0
744,394 - -1.3
745,138 + 16609 mRNA_8241 0.15 -2.5
745,459 - 16609 mRNA_8241 0.33 0.8
745,673 + 16609 mRNA_8241 0.45 -3.5