Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8213

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8212: 16580 - K17878 NNT1 nicotinamide N-methyltransferase, at 680778 to 681996 16580 mRNA_8213: 16581 - KOG1590 Uncharacterized conserved protein, at 682134 to 683094 16581 mRNA_8214: 16582 - BLAST NADH-ubiquinone oxidoreductase 9.5 kDa subunit [R..., at 683320 to 684168 16582

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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681,180 - 16580 mRNA_8212 0.33 -1.9
681,482 - 16580 mRNA_8212 0.58 0.7
681,514 + 16580 mRNA_8212 0.60 -0.4
681,782 - 16580 mRNA_8212 0.82 -2.0
681,808 - 16580 mRNA_8212 0.84 -1.4
681,812 + 16580 mRNA_8212 0.85 -1.3
681,931 - -0.6
681,934 - 0.4
681,942 - -1.0
682,066 - -2.0
682,067 - -2.1
682,074 - -1.0
682,080 + -0.7
682,085 - 0.4
682,085 + -1.1
682,087 - -1.5
682,109 + -2.3
682,230 - 16581 mRNA_8213 0.10 0.4
682,230 - 16581 mRNA_8213 0.10 0.3
683,114 + -0.7
683,270 - -0.6
683,977 + 16582 mRNA_8214 0.77 -4.1