Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8199

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8198: 16566 - K03190 ureD, ureH urease accessory protein, at 654718 to 655775 16566 mRNA_8199: 16567 - Hypothetical Protein, at 655877 to 657716 16567 mRNA_8200: 16568 - KOG4635 Vacuolar import and degradation protein, at 658183 to 660127 16568

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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655,018 + 16566 mRNA_8198 0.28 -2.0
655,024 - 16566 mRNA_8198 0.29 -0.3
655,181 - 16566 mRNA_8198 0.44 -1.1
655,603 + 16566 mRNA_8198 0.84 -2.4
655,738 + -0.5
655,888 - 0.9
656,038 + -0.2
656,066 + 16567 mRNA_8199 0.10 -4.8
656,074 - 16567 mRNA_8199 0.11 -1.8
657,834 - -1.5
658,001 + -2.4
658,129 - -1.9